JASPAR CORE

  1. Home
  2. Collection core

Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0595.1 SREBF1 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP factors
MA0596.1 SREBF2 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP factors
MA0597.1 THAP1 Homo sapiens C2CH THAP-type zinc finger factors THAP-related factors
MA0598.1 EHF Homo sapiens Tryptophan cluster factors Ets-related factors
MA0598.2 EHF Homo sapiens Tryptophan cluster factors Ets-related factors
MA0599.1 KLF5 Homo sapiens C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0600.1 RFX2 Homo sapiens Fork head / winged helix factors RFX-related factors
MA0600.2 RFX2 Homo sapiens Fork head / winged helix factors RFX-related factors
MA0601.1 Arid3b Mus musculus ARID domain factors ARID-related factors
MA0602.1 Arid5a Mus musculus ARID domain factors ARID-related factors
Showing 10 profiles of page 74 from 157 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.