JASPAR CORE

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Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0257.1 zen2 Drosophila melanogaster Homeo domain factors
MA0258.1 ESR2 Homo sapiens Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
MA0258.2 ESR2 Homo sapiens Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
MA0259.1 ARNT::HIF1A Homo sapiens Oryctolagus cuniculus Mus musculus Rattus rattus Basic helix-loop-helix factors (bHLH)::Basic helix-loop-helix factors (bHLH) PAS domain factors::PAS domain factors
MA0260.1 che-1 Caenorhabditis elegans C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0261.1 lin-14 Caenorhabditis elegans
MA0262.1 mab-3 Caenorhabditis elegans DM-type intertwined zinc finger factors
MA0263.1 ceh-10::ttx-3 Caenorhabditis elegans Homeo domain factors::Homeo domain factors Paired-related HD factors::HD-LIM factors
MA0264.1 ceh-22 Caenorhabditis elegans Homeo domain factors NK-related factors
MA0265.1 ABF1 Saccharomyces cerevisiae
Showing 10 profiles of page 38 from 157 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.