JASPAR CORE

Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1188.1 At3g11280 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1189.1 AT5G61620 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1190.1 At4g01280 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1191.1 AT3G10113 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1192.1 At5g58900 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1193.1 At2g38090 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1194.1 AT3G10580 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1195.1 AT5G56840 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1196.1 At5g05790 Arabidopsis thaliana Helix-Turn-Helix Myb-related
MA1197.1 CAMTA1 Arabidopsis thaliana Other CAMTA
Showing 10 profiles of page 134 from 157 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.