JASPAR CORE

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Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0078.1 Sox17 Mus musculus High-mobility group (HMG) domain factors SOX-related factors
MA0079.1 SP1 Homo sapiens C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0079.2 SP1 Homo sapiens Mus musculus Rattus norvegicus C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0079.3 SP1 Homo sapiens C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0080.1 SPI1 Homo sapiens Tryptophan cluster factors Ets-related factors
MA0080.2 SPI1 Homo sapiens Tryptophan cluster factors Ets-related factors
MA0080.3 Spi1 Mus musculus Tryptophan cluster factors Ets-related factors
MA0080.4 SPI1 Homo sapiens Tryptophan cluster factors Ets-related factors
MA0081.1 SPIB Homo sapiens Tryptophan cluster factors Ets-related factors
MA0082.1 squamosa Antirrhinum majus MADS box factors
Showing 10 profiles of page 13 from 157 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.