JASPAR CORE

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Total 1564 profiles

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ID Name Species Class Family Sequence logo
MA1048.1 ERF018 Arabidopsis thaliana AP2/ERF domain
MA1049.1 ERF094 Arabidopsis thaliana AP2/ERF domain
MA1050.1 OsI_08196 Oryza sativa Indica Group Basic helix-loop-helix factors (bHLH) TCP domain
MA1051.1 RAP2-3 Arabidopsis thaliana AP2/ERF domain
MA1052.1 RAP2-6 Arabidopsis thaliana AP2/ERF domain
MA1053.1 ERF109 Arabidopsis thaliana AP2/ERF domain
MA1054.1 ARALYDRAFT_897773 Arabidopsis lyrata subsp. lyrata Basic helix-loop-helix factors (bHLH) TCP domain
MA1055.1 SPL1 Arabidopsis thaliana SBP-type zinc finger
MA1056.1 SPL11 Arabidopsis thaliana SBP-type zinc finger
MA1057.1 SPL12 Arabidopsis thaliana SBP-type zinc finger
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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

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Download the PFMs of the model(s) selected in four different formats.