JASPAR CORE

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Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1008.1 PHYPADRAFT_182268 Physcomitrella patens AP2/ERF domain
MA1009.1 ARF3 Arabidopsis thaliana B3 domain
MA1010.1 PHYPADRAFT_64121 Physcomitrella patens AP2/ERF domain
MA1011.1 PHYPADRAFT_72483 Physcomitrella patens Basic helix-loop-helix factors (bHLH)
MA1012.1 AGL27 Arabidopsis thaliana MADS box factors
MA1013.1 GATA10 Arabidopsis thaliana Other C4 zinc finger-type factors GATA-type zinc fingers
MA1014.1 GATA11 Arabidopsis thaliana Other C4 zinc finger-type factors GATA-type zinc fingers
MA1015.1 GATA12 Arabidopsis thaliana Other C4 zinc finger-type factors GATA-type zinc fingers
MA1016.1 GATA15 Arabidopsis thaliana Other C4 zinc finger-type factors GATA-type zinc fingers
MA1017.1 GATA8 Arabidopsis thaliana Other C4 zinc finger-type factors GATA-type zinc fingers
Showing 10 profiles of page 116 from 157 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.