JASPAR CORE

  1. Home
  2. Collection core

Total 1564 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0898.1 Hmx3 Mus musculus Homeo domain factors NK-related factors
MA0899.1 HOXA10 Homo sapiens Homeo domain factors HOX-related factors
MA0900.1 HOXA2 Homo sapiens Homeo domain factors HOX-related factors
MA0901.1 HOXB13 Homo sapiens Homeo domain factors HOX-related factors
MA0902.1 HOXB2 Homo sapiens Homeo domain factors HOX-related factors
MA0903.1 HOXB3 Homo sapiens Homeo domain factors HOX-related factors
MA0904.1 Hoxb5 Mus musculus Homeo domain factors HOX-related factors
MA0905.1 HOXC10 Homo sapiens Homeo domain factors HOX-related factors
MA0906.1 HOXC12 Homo sapiens Homeo domain factors HOX-related factors
MA0907.1 HOXC13 Homo sapiens Homeo domain factors HOX-related factors
Showing 10 profiles of page 105 from 157 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.