JASPAR Collection FAM

Total 11 profiles

Display profiles
ID Name Included models Sequence logo
MF0011.1 HMG class MA0044 MA0045 MA0077 MA0078 MA0084 MA0087
Showing 1 profiles of page 2 from 2 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.

You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.

Create models with permuted columns from selected models.

Download the PFMs of the model(s) selected in four different formats.