JASPAR Collection CNE

Total 233 profiles

Display profiles
ID Name Consensus Species Sequence logo
CN0231.1 LM231 CCACATCTGGAAAAG Homo sapiens
CN0232.1 LM232 TGGAAGCAGTGAAACAAATG Homo sapiens
CN0233.1 LM233 TGTTGATTCTTTCCAGGAAA Homo sapiens
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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.