Detailed information of matrix profile MA1062.1

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Profile summary
Name: TCP15
Matrix ID: MA1062.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 21241251
Uniprot ID: Q9C9L2  
Source:
Comment: Data is from PMID:24477691

Sequence logo

Frequency matrix

         
A [ 6 5 60 8 2 3 949 6 ]
C [ 2 3 138 950 990 986 12 962 ]
G [ 978 989 771 6 1 2 36 20 ]
T [ 14 2 30 36 7 9 3 12 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1062.1 MA1062 1 TCP15 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0242.1

ChIP-seq Centrality
log(P-value): -2825.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0242.1

ChIP-seq Centrality
log(P-value): -2966.48

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: