JASPAR Changelog

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JASPAR Changelog

2022

2021-09-28

  • UN0608.1: profile deleted, because scattered IC for a long motif.

  • UN0306.1: profile deleted, because the motif looks more like an artefact.

  • UN0310.1: profile deleted, because it is incorrect - it looks like CTCF.

  • UN0125.1: profile deleted, because it has a long spacer.

  • MA1622.1: profile deleted, because it is actually corresponding to the AP1 motif.

  • MA0513.1: profile deleted. because it is inconsistent with the literature.

  • UN0136.1: profile deleted, because it is not a DNA-binding TF, but rather a cofactor.

  • UN0135.1: profile deleted, because it is not a DNA-binding TF, but rather a cofactor.

  • UN0366.1: profile validated with the newly found orthogonal support.

  • UN0368.1: profile validated with the newly found orthogonal support.

  • UN0380.1: profile validated with the newly found orthogonal support.

  • MA1200.1: profile deleted, because it is repetitive and is almost the same with MA0558.1/

  • UN0342.1: profile deleted, because it is updated with a new one with validation.

  • UN0343.1: profile deleted, because it is updated with a new one with validation.

  • UN0371.1: profile deleted, because it is updated with a new one with validation.

2021-09-15

Metadata changes

  • MA0089.1

    • Updated family name.

  • MA0558.1

    • Added family name.

    • Updated UniProt ID.

  • MA1055.1

    • Updated class name.

  • MA1376.1

    • Updated class and family names.

  • UN0362.1

    • Updated TF and class names.

  • UN0353.1

    • Updated class and family names.

  • UN0080.1

    • Updated class and family names.

  • MA0089.2

    • Updated TF, class and family names.

    • Updated UniProt ID.

  • MA0954.1

    • Updated family name.

  • MA0954.2

    • Updated TF and family names.

  • MA1365.1

    • Updated TF name.

  • MA1365.2

    • Updated class name.

  • MA0099.1

    • Changed name to mouse gene IDentifiers and reordered to Fos::Jun.

    • Modified the UniProt data to include both UniProt IDs.

    • Updated family name.

  • MA0099.2

    • Updated family name.

  • MA0099.3

    • Updated family name.

  • MA0140.1

    • Changed name - order of the two parts of the dimer.

    • Updated validation reference.

    • Updated family name.

  • MA0140.2

    • Updated family name.

  • MA1026.1

    • Updated family name.

  • MA1026.2

    • Updated TF and family names.

  • MA0162.1

    • Updated family name.

  • MA0162.2

    • Updated family name.

  • MA0162.3

    • Updated family name.

  • MA0162.4

    • Updated family name.

  • MA1393.1

    • Updated family name.

    • Added UniProt ID.

  • MA1393.2

    • Updated family name.

  • MA0502.1

    • Updated class and family names.

  • MA0502.2

    • Updated family name.

  • MA0529.1

    • Added a class and family names.

  • MA0529.2

    • Added family name.

  • MA0605.1

    • Updated family name.

  • MA0605.2

    • Updated family name.

  • MA0247.2

    • Added a family name.

  • MA0237.2

    • Added a family name.

  • MA0747.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0742.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0741.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0740.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0733.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0732.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0685.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0657.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0599.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0493.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0472.1

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0472.2

    • Changed family name from Three-zinc finger Krüppel-related factors to Three-zinc finger Kruppel-related factors.

  • MA0746.1

    • Updated family name.

  • MA0746.2

    • Updated family name.

  • MA0516.1

    • Updated family name.

  • MA0516.2

    • Updated family name.

  • MA0079.1

    • Updated family name.

  • MA0079.2

    • Updated family name.

  • MA0079.3

    • Updated family name.

  • MA0043.1

    • Updated family name.

  • MA0043.2

    • Updated family name.

  • MA0043.3

    • Updated family name.

  • MA0025.1

    • Updated family name.

  • MA0025.2

    • Updated family name.

  • MA1684.1

    • Incorrectly annotated taxon. Should be vertebrates instead of plants.

    • Updated class and family names.

  • MA1067.1

    • Updated family and class names.

  • MA1288.1

    • Updated TF and family names.

  • MA1283.1

    • Updated family name.

  • MA1287.1

    • Updated family name.

  • MA1291.1

    • Updated family name.

  • MA1286.1

    • Updated family name.

  • MA1046.1

    • Updated class and family names.

  • MA1207.1

    • Updated TF name.

  • UN0351.1

    • Updated class name.

  • MA0550.2

    • Updated class and family names.

  • MA0550.1

    • Updated class and family names.

  • MA0549.1

    • Updated class and family names.

  • MA0590.1

    • Updated class and family names.

  • MA0937.1

    • Updated class and family names.

  • MA1672.1

    • Updated family name.

  • MA1662.1

    • Updated class and family names.

  • UN0379.1

    • Updated class name.

  • MA1351.1

    • Updated family name.

  • MA1210.1

    • Updated family name.

  • MA1202.1

    • Updated family.

  • MA0584.1

    • Updated family name.

  • MA0563.1

    • Updated family name.

  • MA0005.2

    • Updated family name.

  • MA0005.1

    • Updated family name.

  • MA0585.1

    • Updated family name.

  • MA1204.1

    • Updated family name.

  • MA1199.1

    • Updated family name.

  • MA1012.1

    • Updated family name.

  • MA0001.1

    • Updated family name.

  • MA0001.2

    • Updated family name.

  • MA1201.1

    • Updated family name.

  • MA1205.1

    • Updated family name.

  • MA1203.1

    • Updated family name.

  • MA0940.1

    • Updated family name.

  • MA0556.1

    • Updated family name.

  • MA1200.1

    • Updated family name.

  • MA0559.1

    • Updated family name.

  • MA0554.1

    • Updated family name.

  • MA0555.1

    • Updated family name.

  • MA1331.1

    • Updated family and class names.

  • MA1333.1

    • Updated family and class names.

  • MA1332.1

    • Updated family and class names.

  • MA1428.1

    • Updated family name.

  • MA1062.2

    • Updated family name.

  • MA1062.1

    • Updated family name.

  • MA1285.1

    • Updated family and TF names.

  • MA1065.2

    • Updated family name.

  • MA1065.1

    • Updated family name.

  • MA1063.1

    • Updated family name.

  • MA1066.1

    • Updated family name.

  • MA0587.1

    • Updated family name.

  • MA1289.1

    • Updated family name.

  • MA1284.1

    • Updated family name.

  • MA1282.1

    • Updated family name.

  • MA1035.1

    • Updated family name.

  • MA1064.1

    • Updated family name.

  • MA1290.1

    • Updated family name.

  • MA1359.1

    • Updated TF name.

  • MA1363.1

    • Updated TF name.

  • MA1364.1

    • Updated TF name.

  • MA0941.1

    • Updated family name.

  • MA0570.1

    • Updated family name.

  • MA0570.2

    • Updated family name.

  • MA0931.1

    • Updated family name.

  • MA0930.1

    • Updated family name.

  • MA1659.1

    • Updated family name.

  • MA1338.1

    • Updated family and TF names.

  • MA1344.1

    • Updated family name.

  • MA1348.1

    • Updated family name.

  • MA1069.1

    • Updated family name.

  • MA1047.1

    • Updated family name.

  • MA1047.2

    • Updated family name.

  • MA1335.1

    • Updated family name.

  • MA1336.1

    • Updated family name.

  • MA1070.1

    • Updated family name.

  • MA1346.1

    • Updated family name.

  • MA1068.1

    • Updated family name.

  • MA0588.1

    • Updated family name.

  • MA0968.1

    • Updated family name.

  • MA0968.2

    • Updated family name.

  • MA1349.1

    • Updated family name.

  • MA1425.1

    • Updated family name.

  • MA0551.1

    • Updated family name.

  • MA1343.1

    • Updated family name.

  • MA0967.1

    • Updated family name.

  • MA1337.1

    • Updated family name.

  • MA1350.1

    • Updated family name.

  • MA1345.1

    • Updated family name.

  • MA1341.1

    • Updated family name.

  • MA1334.1

    • Updated TF and family names.

  • MA1340.1

    • Updated family name.

  • MA1339.1

    • Updated family name.

  • MA0581.1

    • Updated class and family names.

    • Updated validation reference.

  • MA0565.1

    • Updated class and family names.

    • Updated validation reference.

  • MA0565.2

    • Updated class and family names.

  • MA0564.1

    • Updated family name.

    • Updated validation reference.

  • MA0943.1

    • Updated family name.

  • MA0944.1

    • Updated family name.

  • MA1009.1

    • Updated family name.

  • MA1206.1

    • Updated family name.

  • MA0942.1

    • Updated class and family names.

  • MA0582.1

    • Updated class and family names.

  • MA0583.1

    • Updated TF, class and family names.

  • MA1045.1

    • Updated class and family names.

  • MA0939.1

    • Updated TF, class and family names.

  • MA0936.1

    • Updated TF, class and family names.

  • MA1044.1

    • Updated class and family names.

  • MA1674.1

    • Updated class and family names.

  • MA1660.1

    • Updated TF, class and family names.

  • MA1678.1

    • Updated class and family names.

  • MA1676.1

    • Updated class and family names.

  • MA1663.1

    • Updated class and family names.

  • MA1677.1

    • Updated class and family names.

  • MA1427.1

    • Updated class and family names.

  • UN0344.1

    • Updated TF, class and family names.

  • MA0935.1

    • Updated class and family names.

  • MA1675.1

    • Updated class and family names.

  • MA1043.1

    • Updated class and family names.

  • MA0938.1

    • Updated class and family names.

  • MA0557.1

    • Updated class and family names.

  • MA1382.1

    • Updated class and family names.

  • MA1309.1

    • Updated class and family names.

  • MA1081.1

    • Updated class and family names.

  • MA1301.1

    • Updated class and family names.

  • MA0589.1

    • Updated TF, class and family names.

  • MA1295.1

    • Updated class and family names.

  • MA1297.1

    • Updated class and family names.

  • MA1078.1

    • Updated class and family names.

  • MA1316.1

    • Updated class and family names.

  • MA1089.1

    • Updated class and family names.

  • MA1304.1

    • Updated class and family names.

  • MA1086.1

    • Updated class and family names.

  • MA1080.1

    • Updated class and family names.

  • MA1311.1

    • Updated class and family names.

  • MA1311.2

    • Updated class and family names.

  • MA1075.1

    • Updated class and family names.

  • MA1087.1

    • Updated class and family names.

  • MA1093.1

    • Updated class and family names.

  • MA1317.1

    • Updated class and family names.

  • MA1315.1

    • Updated class and family names.

  • MA1094.1

    • Updated class and family names.

  • MA1088.1

    • Updated class and family names.

  • MA1085.1

    • Updated class and family names.

  • MA1085.2

    • Updated class and family names.

  • MA1090.1

    • Updated class and family names.

  • MA1077.1

    • Updated class and family names.

  • MA1312.1

    • Updated class and family names.

  • MA1300.1

    • Updated class and family names.

  • MA1310.1

    • Updated class and family names.

  • MA1307.1

    • Updated class and family names.

  • MA1076.1

    • Updated class and family names.

  • MA1076.2

    • Updated class and family names.

  • MA1299.1

    • Updated class and family names.

  • MA1079.1

    • Updated class and family names.

  • MA1313.1

    • Updated class and family names.

  • MA1306.1

    • Updated class and family names.

  • MA1302.1

    • Updated class and family names.

  • MA1314.1

    • Updated class and family names.

  • MA1303.1

    • Updated class and family names.

  • MA1298.1

    • Updated class and family names.

  • MA1318.1

    • Updated class and family names.

  • MA1305.1

    • Updated class and family names.

  • MA1296.1

    • Updated class and family names.

  • MA1308.1

    • Updated class and family names.

  • MA1083.1

    • Updated class and family names.

  • MA1092.1

    • Updated class and family names.

  • MA1091.1

    • Updated class and family names.

  • MA1084.1

    • Updated class and family names.

  • MA0932.1

    • Updated the family (it should not have a family).

  • MA0933.1

    • Updated the family (it should not have a family).

  • MA0934.1

    • Updated the family (it should not have a family).

  • MA1377.1

    • Updated class and family names.

  • MA0553.1

    • Updated class and family names.

  • MA0571.1

    • Updated class and family names.

  • MA1378.1

    • Adding UniProt ID.

    • Updated TF, class and family names.

  • MA1235.1

    • Updated class and family names.

  • MA0978.1

    • Updated class and family names.

  • MA1670.1

    • Updated class and family names.

  • MA0971.1

    • Updated class and family names.

  • MA1669.1

    • Updated class and family names.

  • MA1218.1

    • Updated the TF, class and family names.

  • MA1250.1

    • Updated the TF, class and family names.

  • MA1243.1

    • Updated the TF, class and family names.

  • MA0986.1

    • Updated class and family names.

  • MA1242.1

    • Updated the TF, class and family names.

  • MA1258.1

    • Updated the TF name.

    • Added UniProt ID.

    • Updated class and family names.

  • MA1226.1

    • Updated the TF name.

    • Updated class and family names.

  • MA1259.1

    • Updated the TF, class and family names.

  • MA1227.1

    • Updated class and family names.

  • MA1227.2

    • Updated class and family names.

  • MA1233.1

    • Updated class and family names.

    • Updated UniProt ID.

  • MA1233.2

    • Updated class and family names.

  • MA1230.1

    • Updated class and family names.

  • MA1238.1

    • Updated class and family names.

  • MA1238.2

    • Updated class and family names.

  • MA1228.1

    • Updated class and family names.

    • Updated the TF name.

    • Updated UniProt ID.

  • MA1229.1

    • Updated class and family names.

    • Updated the TF name.

  • MA1253.1

    • Updated TF, class and family names.

  • MA1223.1

    • Updated class and family names.

  • MA0995.1

    • Updated class and family names.

  • MA0995.2

    • Updated class and family names.

  • MA1241.1

    • Updated TF, class and family names.

  • MA1220.1

    • Updated class and family names.

  • MA1234.1

    • Updated class and family names.

  • MA1248.1

    • Updated TF, class and family names.

  • MA1424.1

    • Updated class and family names.

  • MA1222.1

    • Updated TF, class and family names.

  • MA1679.1

    • Updated class and family names.

  • MA1048.1

    • Updated class and family names.

  • MA1260.1

    • Updated TF, class and family names.

  • MA0979.1

    • Updated class and family names.

  • MA1219.1

    • Updated TF name.

    • Added UniProt ID.

    • Updated class and family names.

  • MA1251.1

    • Updated TF, class and family names.

  • MA0980.1

    • Updated class and family names.

  • MA0980.2

    • Updated class and family names.

  • MA1263.1

    • Updated TF, class and family names.

  • MA1232.1

    • Updated TF, class and family names.

  • MA1265.1

    • Updated class and family names.

  • MA1265.2

    • Updated class and family names.

  • MA1240.1

    • Updated class and family names.

  • MA1247.1

    • Updated class and family names.

  • MA1001.1

    • Updated class and family names.

  • MA1001.2

    • Updated class and family names.

  • MA1005.1

    • Updated class and family names.

  • MA1005.2

    • Updated class and family names.

  • MA0994.1

    • Updated class and family names.

  • MA0992.1

    • Updated class and family names.

  • MA0992.2

    • Updated class and family names.

  • MA0993.1

    • Updated class and family names.

  • MA1246.1

    • Updated class and family names.

  • MA1252.1

    • Updated TF, class and family names.

  • MA1257.1

    • Updated class and family names.

  • MA1256.1

    • Updated TF, class and family names.

  • MA1051.1

    • Updated class and family names.

  • MA1049.1

    • Updated class and family names.

  • MA1231.1

    • Updated class and family names.

  • MA1004.1

    • Updated class and family names.

  • MA1264.1

    • Updated UniProt ID.

    • Updated TF name.

    • Updated class and family names.

  • MA0999.1

    • Updated class and family names.

  • MA0567.1

    • Updated class and family names.

  • MA1006.1

    • Updated class and family names.

  • MA0998.1

    • Updated class and family names.

  • MA1262.1

    • Updated class and family names.

  • MA1225.1

    • Updated class and family names.

  • MA1000.2

    • Updated class and family names.

  • MA1000.1

    • Updated class and family names.

  • MA1239.1

    • Updated class and family names.

  • MA1221.1

    • Updated TF, class and family names.

  • MA1245.1

    • Updated TF, class and family names.

  • MA1245.2

    • Updated TF, class and family names.

  • MA1244.1

    • Updated class and family names.

  • MA0997.1

    • Updated class and family names.

  • MA0975.1

    • Updated class and family names.

  • MA0976.1

    • Updated class and family names.

  • MA0976.2

    • Updated class and family names.

  • MA1671.1

    • Updated class and family names.

  • MA1266.1

    • Updated TF, class and family names.

  • MA1236.1

    • Updated TF, class and family names.

    • Added UniProt ID.

  • MA1261.1

    • Updated TF, class and family names.

  • MA1053.1

    • Updated class and family names.

  • MA1414.1

    • Updated class and family names.

  • MA1664.1

    • Updated family name (it should not have a name).

  • MA1667.1

    • Updated family name (it should not have a name).

  • MA1666.1

    • Updated family name (it should not have a name).

  • MA1665.1

    • Updated family name (it should not have a name).

  • MA1212.1

    • Updated TF and family names.

  • MA1213.1

    • Updated TF and family names.

  • MA0953.1

    • Updated family name.

  • MA0541.1

    • Updated class and family names.

  • MA1209.1

    • Updated TF and family names.

  • MA0008.1

    • Updated family name.

  • MA0509.1

    • Updated class name.

  • MA0509.2

    • Updated class name.

  • MA0510.1

    • Updated class name.

  • MA0510.2

    • Updated class name.

  • MA0600.1

    • Updated class name.

  • MA0600.2

    • Updated class name.

  • MA0799.1

    • Updated class name.

  • MA1554.1

    • Updated class name.

  • MA0798.1

    • Updated class name.

  • MA0798.2

    • Updated class name.

  • MA0008.2

    • Updated family name.

  • MA0950.1

    • Updated family name.

  • MA1214.1

    • Updated TF and family names.

  • MA0951.1

    • Updated family name.

  • MA0952.1

    • Updated family name.

  • MA0110.1

    • Updated family name.

  • MA0110.2

    • Updated family name.

  • MA0110.3

    • Updated family name.

  • MA1215.1

    • TF and family names.

  • MA1327.1

    • Added UniProt ID.

    • Updated TF and family names.

  • MA1327.2

    • Updated TF and family names.

  • MA1211.1

    • Updated TF and family names.

    • Updated UniProt ID.

  • MA1406.1

    • Updated TF and family names.

  • MA1024.1

    • Updated family name.

  • MA1198.1

    • Updated family name.

  • MA0573.1

    • Updated family name.

  • MA0990.1

    • Updated TF and family names.

  • MA1369.1

    • Updated family name.

  • MA1375.1

    • Updated family name.

  • MA1328.1

    • Updated TF and family names.

    • Updated UniProt ID.

  • MA1326.1

    • Updated family name.

  • MA1330.1

    • Updated family name.

    • Added UniProt ID.

  • MA1213.1

    • Updated family name.

    • Updated UniProt ID.

  • MA1329.1

    • Updated family name.

    • Added UniProt ID.

  • MA1329.2

    • Updated family name.

  • MA0121.1

    • Updated family name.

  • MA0948.1

    • Updated family name.

  • MA0946.1

    • Updated family name.

  • MA0947.1

    • Updated family name.

  • MA0949.1

    • Updated family name.

  • MA0945.1

    • Updated family name.

  • MA1387.1

    • Updated TF, class and family names.

  • MA1165.1

    • Updated class and family names.

  • MA1386.1

    • Updated class and family names.

  • MA1383.1

    • Updated class and family names.

  • MA1390.1

    • Updated class and family names.

  • MA1384.1

    • Updated class and family names.

  • MA1167.1

    • Updated class and family names.

  • MA1388.1

    • Updated TF, class and family names.

  • MA1385.1

    • Updated class and family names.

    • Added UniProt ID.

  • MA1027.1

    • Updated family name.

  • MA1168.1

    • Updated class and family names.

  • MA1166.1

    • Updated class and family names.

  • MA1164.1

    • Updated class and family names.

  • MA1389.1

    • Updated class and family names.

  • MA1028.1

    • Updated family name.

  • MA1163.1

    • Updated class and family names.

  • MA1178.1

    • Updated class and family names.

  • MA1172.1

    • Updated class and family names.

  • MA1180.1

    • Updated class and family names.

  • MA1426.1

    • Updated family name.

  • MA1181.1

    • Updated class name.

  • MA1170.1

    • Updated class name.

  • MA1036.1

    • Updated family name.

  • MA1169.1

    • Updated class name.

  • MA1173.1

    • Updated class name.

  • MA1179.1

    • Updated class name.

  • MA1171.1

    • Updated class name.

  • MA1038.1

    • Updated family name.

  • MA1294.1

    • Updated class and family names.

  • MA1175.1

    • Updated class name.

  • MA1293.1

    • Updated class and family names.

  • MA1177.1

    • Updated class name.

  • MA0576.1

    • Updated family name.

  • MA1392.1

    • Updated class name.

  • MA1042.1

    • Updated family name.

  • MA0575.1

    • Updated TF and family names.

  • MA1292.1

    • Updated class and family names.

  • MA1394.1

    • Added UniProt ID.

    • Updated class name.

  • MA1394.2

    • Updated class name.

  • MA1039.1

    • Updated family name.

  • MA1391.1

    • Updated class name.

  • MA1391.2

    • Updated class name.

  • MA1040.1

    • Updated family name.

  • MA1174.1

    • Updated class name.

  • MA1037.1

    • Updated family name.

  • MA0574.1

    • Updated family name.

  • MA1041.1

    • Updated family name.

    • Updated UniProt ID.

  • MA1176.1

    • Updated class name.

  • MA1184.1

    • Updated class name.

  • MA1185.1

    • Updated TF and class names.

    • Updated UniProt ID.

  • MA1397.1

    • Updated class name.

    • Added UniProt ID.

  • MA1190.1

    • Updated class name.

  • MA1182.1

    • Updated TF and class names.

  • MA1401.1

    • Updated TF and class names.

  • MA0972.1

    • Updated family name.

  • MA1187.1

    • Updated TF and class names.

  • MA1398.1

    • Updated class name.

  • MA1398.2

    • Updated class name.

  • MA1183.1

    • Updated class name.

  • MA1195.1

    • Updated class name.

    • Added UniProt ID.

  • MA1194.1

    • Updated class name.

    • Added UniProt ID.

  • MA1681.1

    • Updated class and family names.

  • MA1192.1

    • Updated TF and class names.

    • Added UniProt ID.

  • MA1186.1

    • Updated TF, class and family names.

    • Updated UniProt ID.

  • MA1356.1

    • Updated class name.

  • MA1352.1

    • Updated class name.

    • Updated validation reference.

  • MA1355.1

    • Updated TF and class names.

    • Updated UniProt ID.

  • MA1354.1

    • Updated class name.

  • MA1196.1

    • Updated class name.

    • Added UniProt ID.

  • MA1188.1

    • Updated class name.

    • Added UniProt ID.

  • MA1193.1

    • Updated class name.

    • Added UniProt ID.

  • MA1353.1

    • Updated class name.

  • MA1400.1

    • Updated class name.

    • Added UniProt ID.

  • MA1191.1

    • Updated TF and class names.

  • MA1189.1

    • Updated class name.

  • MA0579.1

    • Updated family name.

  • MA0970.1

    • Updated class name.

  • MA1197.1

    • Updated class and family names.

  • MA0969.1

    • Updated TF, class and family names.

  • MA1368.2

    • Updated class name.

    • Updated validation reference.

  • MA1368.1

    • Updated validation reference.

  • MA1661.1

    • Updated TF and class names.

    • Updated UniProt ID.

  • MA1366.1

    • Updated TF name.

  • MA1367.1

    • Added UniProt ID.

  • MA1404.1

    • Updated class and family names.

  • MA1403.1

    • Updated class and family names.

  • MA1402.1

    • Updated class and family names.

  • MA1682.1

    • Updated class and family names.

  • MA1161.1

    • Updated class and family names.

  • MA1162.1

    • Updated class and family names.

  • MA1380.1

    • Updated TF, class and family names.

  • MA1379.1

    • Updated class and family names.

  • MA1160.1

    • Updated TF name.

  • MA1373.1

    • Updated TF name.

  • MA1372.1

    • Updated TF name.

  • UN0354.1

    • Updated class and family names.

  • MA1013.1

    • Updated family name.

  • MA1014.1

    • Updated family name.

  • MA1325.1

    • Updated family name.

  • MA1396.1

    • Updated family name.

  • MA1017.1

    • Updated family name.

  • MA1437.1

    • Updated family name.

  • MA1104.1

    • Updated family name.

  • MA1104.2

    • Updated family name.

  • MA1439.1

    • Updated family name.

  • MA1701.1

    • Updated family name.

  • UN0097.1

    • Updated family name.

  • UN0271.1

    • Updated family name.

  • UN0272.1

    • Updated family name.

  • MA1018.1

    • Updated family name.

  • MA1015.1

    • Updated family name.

  • MA1324.1

    • Updated family name.

  • MA1016.1

    • Updated family name.

  • MA1323.1

    • Updated family name.

  • MA1277.1

    • Updated TF, class and family names.

  • MA1280.1

    • Updated TF, class and family names.

  • MA1272.1

    • Updated TF, class and family names.

  • MA0982.1

    • Updated TF, class and family names.

  • MA1274.1

    • Updated TF, class and family names.

  • MA0984.1

    • Updated class and family names.

  • MA1270.1

    • Updated TF, class and family names.

  • MA1071.1

    • Updated class and family names.

  • MA0983.1

    • Updated class and family names.

  • MA0981.1

    • Updated class and family names.

  • MA0977.1

    • Updated class and family names.

  • MA1276.1

    • Updated TF, class and family names.

  • MA1273.1

    • Updated class and family names.

  • MA1269.1

    • Updated class and family names.

  • MA1279.1

    • Updated TF, class and family names.

  • MA1268.1

    • Updated TF, class and family names.

  • MA0974.1

    • Updated class and family names.

  • MA0974.2

    • Updated class and family names.

  • MA0973.1

    • Updated class and family names.

  • MA1278.1

    • Updated TF, class and family names.

  • MA1267.1

    • Updated TF, class and family names.

  • MA1275.1

    • Updated TF, class and family names.

  • MA1281.1

    • Updated TF, class and family names.

  • MA1673.1

    • Updated class name.

  • MA0578.1

    • Updated class and family names.

  • MA1056.1

    • Updated class and family names.

  • MA1058.1

    • Updated class and family names.

  • MA0577.1

    • Updated class name.

  • MA0577.2

    • Updated class name.

  • MA1322.1

    • Updated class name.

  • MA1059.1

    • Updated class name.

  • MA0072.1

    • Updated TF name.

  • MA1059.2

    • Updated class name.

  • MA1320.1

    • Updated class name.

  • MA1057.1

    • Updated class name.

  • MA1060.1

    • Updated class name.

  • MA1321.1

    • Updated TF and class name.

  • MA1467.1

    • Updated TF and family names.

  • MA1143.1

    • Updated TF and family names.

  • MA1145.1

    • Updated TF and family names.

  • MA0489.1

    • Updated TF name.

  • MA0492.1

    • Updated TF name.

  • MA1127.1

    • Updated family name.

  • MA1128.1

    • Updated family name.

  • MA1130.1

    • Updated family name.

  • MA1134.1

    • Updated family name.

  • MA1135.1

    • Updated family name.

  • MA1137.1

    • Updated family name.

  • MA1138.1

    • Updated family name.

  • MA1141.1

    • Updated family name.

  • MA1142.1

    • Updated family name.

  • MA1144.1

    • Updated family name.

  • MA0656.1

    • Updated TF and family names.

  • MA0730.1

    • Updated TF name.

  • MA0810.1

    • Updated TF name.

  • MA0812.1

    • Updated TF name.

  • MA0813.1

    • Updated TF name.

  • MA0814.1

    • Updated TF name.

  • MA0814.2

    • Updated TF name.

  • MA0815.1

    • Updated TF name.

  • MA0828.1

    • Updated TF and family names.

  • MA0596.1

    • Updated family name.

  • MA0829.2

    • Updated TF and family names.

  • MA0829.1

    • Updated TF and family names.

  • MA0872.1

    • Updated TF name.

  • MA1126.1

    • Updated TF and family names.

  • MA1129.1

    • Updated TF and family names.

  • MA1131.1

    • Updated TF and family names.

  • MA1133.1

    • Updated TF name.

  • MA1136.1

    • Updated TF and family names.

  • MA1139.1

    • Updated TF and family names.

  • MA1140.1

    • Updated TF name.

  • MA1140.2

    • Updated TF name.

  • MA0548.1

    • Updated family name.

  • MA0548.2

    • Updated family name.

  • MA0586.1

    • Updated class name.

  • MA0586.2

    • Updated class name.

  • MA0265.1

    • Updated class and family names.

  • MA1630.1

    • Updated family name.

  • UN0269.1

    • Updated family name.

  • MA0038.1

    • Updated family name.

  • MA0038.2

    • Updated family name.

  • MA0039.1

    • Updated family name.

  • MA0039.2

    • Updated family name.

  • MA0039.3

    • Updated family name.

  • MA0039.4

    • Updated family name.

  • MA0088.1

    • Updated family name.

  • MA0088.2

    • Updated family name.

  • UN0089.1

    • Updated family name.

  • MA0086.1

    • Updated family name.

  • MA0086.2

    • Updated family name.

  • MA0126.1

    • Updated family name.

  • MA0452.1

    • Updated family name.

  • MA0452.2

    • Updated family name.

  • MA0454.1

    • Updated family name.

  • MA0456.1

    • Updated family name.

  • MA0531.1

    • Updated family name.

  • MA0260.1

    • Updated family name.

  • MA0537.1

    • Updated family name.

  • MA0056.1

    • Updated TF and family name.

  • MA0056.2

    • Updated TF and family name.

  • MA0095.1

    • Updated family name.

  • MA0095.2

    • Updated family name.

  • MA0130.1

    • Updated family name.

  • MA0139.1

    • Updated family name.

  • MA0146.1

    • Updated family name.

  • MA0146.2

    • Updated family name.

  • MA0163.1

    • Updated family name.

  • MA0463.1

    • Updated family name.

    • Updated validation reference.

  • MA0463.2

    • Updated family name.

  • MA0508.1

    • Updated family name.

  • MA0508.2

    • Updated family name.

  • MA0508.3

    • Updated family name.

  • MA0483.1

    • Updated family name.

  • MA0528.1

    • Updated family name.

  • MA0528.2

    • Updated family name.

  • MA0694.1

    • Updated family name.

  • MA0695.1

    • Updated family name.

  • MA0696.1

    • Updated family name.

  • MA0697.1

    • Updated family name.

  • MA0698.1

    • Updated family name.

  • MA0731.1

    • Updated family name.

  • MA0734.1

    • Updated family name.

  • MA0734.2

    • Updated family name.

  • MA0735.1

    • Updated family name.

  • MA0736.1

    • Updated family name.

  • MA0737.1

    • Updated family name.

  • MA0743.1

    • Updated family name.

    • Updated validation reference.

  • MA0743.2

    • Updated family name.

  • MA0744.1

    • Updated family name.

    • Updated validation reference.

  • MA0744.2

    • Updated family name.

  • MA0745.1

    • Updated family name.

  • MA0745.2

    • Updated family name.

  • MA0748.1

    • Updated family name.

  • MA0748.2

    • Updated family name.

  • MA0750.1

    • Updated family name.

  • MA0750.2

    • Updated family name.

  • MA0751.1

    • Updated family name.

  • MA0752.1

    • Updated family name.

  • MA1102.1

    • Updated family name.

  • MA1102.2

    • Updated family name.

  • MA1124.1

    • Updated family name.

  • MA1125.1

    • Updated family name.

  • MA1154.1

    • Updated family name.

  • MA1155.1

    • Updated family name.

  • MA1491.1

    • Updated family name.

  • MA1522.1

    • Updated family name.

  • MA1544.1

    • Updated family name.

  • MA1545.1

    • Updated family name.

  • MA1548.1

    • Updated family name.

  • MA1558.1

    • Updated family name.

  • MA1559.1

    • Updated family name.

  • MA1578.1

    • Updated family name.

  • MA1579.1

    • Updated family name.

  • MA1580.1

    • Updated family name.

  • MA1581.1

    • Updated family name.

  • MA1584.1

    • Updated family name.

  • MA1585.1

    • Updated family name.

  • MA1587.1

    • Updated family name.

  • MA1588.1

    • Updated family name.

  • MA1589.1

    • Updated family name.

  • MA1592.1

    • Updated family name.

  • MA1593.1

    • Updated family name.

  • MA1596.1

    • Updated family name.

  • MA1597.1

    • Updated family name.

  • MA1599.1

    • Updated family name.

  • MA1600.1

    • Updated family name.

  • MA1601.1

    • Updated family name.

  • MA1602.1

    • Updated family name.

  • MA1646.1

    • Updated family name.

  • MA1649.1

    • Updated family name.

  • MA1650.1

    • Updated family name.

  • MA1651.1

    • Updated family name.

  • MA1653.1

    • Updated family name.

  • MA1654.1

    • Updated family name.

  • MA1656.1

    • Updated family name.

  • MA1657.1

    • Updated family name.

  • MA0863.1

    • Updated family name.

  • MA1644.1

    • Updated family name.

  • MA0313.1

    • Updated family name.

  • MA0314.1

    • Updated family name.

  • MA0316.1

    • Updated family name.

  • MA1032.1

    • Updated family and class names.

  • MA1034.1

    • Updated class and family names.

  • MA1007.1

    • Updated class and family names.

  • MA1008.1

    • Updated class and family names.

  • MA1010.1

    • Updated class and family names.

  • MA1023.1

    • Updated class and family names.

  • MA0123.1

    • Updated class and family names.

  • MA1685.1

    • Updated class and family names.

  • MA1686.1

    • Updated class and family names.

  • MA1687.1

    • Updated class and family names.

  • MA1688.1

    • Updated class and family names.

  • MA1689.1

    • Updated class and family names.

  • MA1690.1

    • Updated class and family names.

  • MA1691.1

    • Updated class and family names.

  • MA1692.1

    • Updated class and family names.

  • MA1693.1

    • Updated class and family names.

  • MA1694.1

    • Updated class and family names.

  • MA1695.1

    • Updated class and family names.

  • MA1696.1

    • Updated class and family names.

  • MA1697.1

    • Updated class and family names.

  • MA1698.1

    • Updated class and family names.

  • MA1054.1

    • Updated family name.

  • MA1095.1

    • Updated family name.

  • MA1096.1

    • Updated family name.

  • MA1097.1

    • Updated family name.

  • MA1098.1

    • Updated family name.

  • UN0026.1

    • Updated family name.

  • UN0030.1

    • Updated family name.

  • UN0032.1

    • Updated family name.

  • UN0034.1

    • Updated family name.

  • UN0048.1

    • Updated family name.

  • MA1019.1

    • Updated family name.

  • MA1430.1

    • Updated family name.

  • MA1050.1

    • Updated family name.

  • MA1031.1

    • Updated family name.

  • MA1410.1

    • Updated family name.

  • MA0961.1

    • Updated UniProt ID.

  • MA0096.1

    • Updated family name.

  • MA0097.1

    • Updated family name.

  • UN0022.1

    • Updated family name.

  • UN0041.1

    • Updated family name.

  • UN0063.1

    • Updated family name.

  • UN0074.1

    • Updated family name.

  • MA0129.1

    • Updated family name.

  • MA1033.1

    • Updated family name.

  • MA1407.1

    • Updated family name.

    • Updated UniProt ID.

  • MA0128.1

    • Updated family name.

  • MA1417.1

    • Updated family name.

  • UN0002.1

    • Updated class and family names.

  • UN0007.1

    • Updated class and family names.

  • UN0016.1

    • Updated class and family names.

  • UN0027.1

    • Updated class and family names.

  • UN0036.1

    • Updated class and family names.

  • UN0039.1

    • Updated class and family names.

  • UN0050.1

    • Updated class and family names.

  • UN0059.1

    • Updated class and family names.

  • UN0060.1

    • Updated class and family names.

  • MA0987.1

    • Updated class and family names.

  • MA0989.1

    • Updated class and family names.

  • MA1022.1

    • Updated class and family names.

  • MA0020.1

    • Updated class and family names.

  • MA0021.1

    • Updated class and family names.

  • MA0053.1

    • Updated class and family names.

  • MA0064.1

    • Updated class and family names.

  • UN0275.1

    • Updated family name.

  • MA1408.1

    • Updated class name.

  • UN0051.1

    • Updated family name.

  • UN0067.1

    • Updated family name.

  • MA0082.1

    • Updated family name.

  • UN0072.1

    • Updated class and family names.

  • UN0276.1

    • Removed UniProt ID.

  • MA1409.1

    • Updated class and family names.

  • UN0076.1

    • Updated class and family names.

  • UN0013.1

    • Updated class and family names.

  • UN0070.1

    • Updated class and family names.

  • MA0955.1

    • Updated class and family names.

    • Removed UniProt ID.

  • UN0029.1

    • Updated family name.

  • UN0047.1

    • Updated family name.

  • UN0057.1

    • Updated family name.

  • UN0077.1

    • Updated family name.

  • UN0078.1

    • Updated family name.

  • MA0034.1

    • Updated family name.

  • MA1030.1

    • Updated family name.

  • MA0054.1

    • Updated family name.

  • UN0010.1

    • Updated class and family names.

  • UN0068.1

    • Updated class and family names.

  • UN0044.1

    • Updated class name.

  • MA1470.1

    • Updated TF name.

  • MA1472.1

    • Updated TF name.

  • MA1475.1

    • Updated TF name.

  • MA1494.1

    • Updated TF name.

  • MA1527.1

    • Updated TF name.

  • MA1528.1

    • Updated TF name.

  • MA1536.1

    • Updated TF name.

  • MA1537.1

    • Updated TF name.

  • MA1538.1

    • Updated TF name.

  • MA1539.1

    • Updated TF name.

  • MA1546.1

    • Updated TF name.

  • MA1549.1

    • Updated TF name.

  • MA1552.1

    • Updated TF name.

  • MA1553.1

    • Updated TF name.

  • MA1555.1

    • Updated TF name.

  • MA1556.1

    • Updated TF name.

  • MA1568.1

    • Updated TF and family names.

  • MA1618.1

    • Updated family name.

  • MA1570.1

    • Updated TF and family names.

  • MA1619.1

    • Updated TF and family names.

  • MA1620.1

    • Updated TF and family names.

  • MA0831.1

    • Updated family name.

  • MA0831.2

    • Updated family name.

  • MA0691.1

    • Updated family name.

  • MA1575.1

    • Updated TF name.

  • MA1576.1

    • Updated TF name.

  • MA1638.1

    • Updated family name.

  • UN0253.1

    • Updated family name.

  • MA1631.1

    • Updated TF and family names.

  • MA1635.1

    • Updated TF and family names.

  • MA1636.1

    • Updated TF and family name.

  • MA1639.1

    • Updated TF name.

  • MA1640.1

    • Updated TF name.

  • MA1642.1

    • Updated TF and family names.

  • MA1648.1

    • Updated TF and family names.

  • UN0111.1

    • Updated TF name.

  • MA0151.1

    • Updated class and family names.

  • MA0601.1

    • Updated class and family names.

  • MA0602.1

    • Updated class and family names.

  • MA0466.1

    • Updated family name.

  • MA0466.2

    • Updated family name.

  • MA0837.1

    • Updated family name.

  • MA0838.1

    • Updated family name.

  • MA0102.1

    • Updated family name.

  • MA0102.2

    • Updated family name.

  • MA0102.3

    • Updated family name.

  • MA0102.4

    • Updated family name.

  • MA0836.1

    • Updated family name.

  • MA0836.2

    • Updated family name.

  • MA0639.1

    • Updated family name.

  • MA0019.1

    • Updated family name.

  • UN0251.1

    • Updated family name.

  • MA1444.1

    • Updated family name.

  • MA1418.1

    • Updated class name.

  • MA1419.1

    • Updated class name.

  • MA1420.1

    • Updated class name.

  • MA0244.1

    • Updated family name.

  • UN0306.1

    • Updated class and family names.

  • MA0521.1

    • Updated family name.

  • MA0091.1

    • Updated family name.

  • MA0092.1

    • Updated family name.

  • MA0522.1

    • Updated family name.

  • MA0522.2

    • Updated family name.

  • MA0522.3

    • Updated family name.

  • MA0830.1

    • Updated family name.

  • MA0830.2

    • Updated family name.

  • MA0865.1

    • Updated class and family names.

  • MA0024.1

    • Updated class and family names.

  • MA0024.2

    • Updated class and family names.

  • MA0024.3

    • Updated class and family names.

  • MA0864.1

    • Updated class and family names.

  • MA0864.2

    • Updated class and family names.

  • MA0469.1

    • Updated class and family names.

  • MA0469.2

    • Updated class and family names.

  • MA0469.3

    • Updated class and family names.

  • MA0470.1

    • Updated class and family names.

  • MA0470.2

    • Updated class and family names.

  • MA0471.1

    • Updated class and family names.

  • MA0471.2

    • Updated class and family names.

  • MA0758.1

    • Updated class and family names.

  • MA1122.1

    • Updated class and family names.

  • MA1483.1

    • Updated family name.

  • MA0759.1

    • Updated family name.

  • MA0764.1

    • Updated family name.

  • MA0764.2

    • Updated family name.

  • MA0765.1

    • Updated family name.

  • MA0765.2

    • Updated family name.

  • MA0156.1

    • Updated family name.

  • MA0156.2

    • Updated family name.

  • MA0598.1

    • Updated family name.

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  • MA0842.2

    • Updated family name.

  • MA1520.1

    • Updated family name.

  • MA1521.1

    • Updated family name.

  • MA0501.1

    • Updated family name.

  • MA0145.1

    • Updated TF name.

  • MA0145.2

    • Updated TF name.

  • MA0295.1

    • Updated class and family names.

  • MA0296.1

    • Updated class and family names.

  • MA0297.1

    • Updated class and family names.

  • MA0317.1

    • Updated class and family names.

  • MA0365.1

    • Updated class name.

  • MA0446.1

    • Updated class and family names.

  • MA0458.1

    • Updated class and family names.

  • MA0546.1

    • Updated class and family names.

  • MA0920.1

    • Updated class and family names.

  • MA0929.1

    • Updated class and family names.

  • MA1440.1

    • Updated class and family names.

  • MA1446.1

    • Updated class and family names.

  • MA0026.1

    • Updated family name.

  • MA0916.1

    • Updated family name.

  • MA1448.1

    • Updated family name.

  • UN0137.1

    • Removed the comment.

Deleted profiles

  • MA0045.1

    • Remove the profile.

    • Poor quality.

  • MA0109.1

    • Removed the profile.

    • Wrong annotation. The profile was moved to UNVALIDATED collection.

  • MA0345.1

    • Remove the profile.

    • Poor quality.

  • MA0346.1

    • Remove the profile.

    • Poor quality.

  • MA0383.1

    • Remove the profile.

    • Poor quality.

  • MA1395.1

    • Remove the profile.

    • It is duplicated.

  • MA0298.1

    • Remove the profile.

    • Poor quality.

  • MA0120.1

    • Remove the profile.

    • Poor quality.

  • UN0192.1

    • Remove the profile.

    • ZNF454 motif will be added to the CORE collection.

  • MA0145.3

    • Remove the profile.

    • It is wrongly assigned.

  • MA0057.1

    • Delete the profile.

    • It is duplicated.

  • MA0503.1

    • Delete the profile.

    • It is duplicated.

  • UN0329.1

    • Remove the profile.

    • There is the same motif for the same TF in non-validated.

  • UN0193.1

    • Remove the profile.

    • ZNF454 motif will be added to the CORE collection.

  • UN0363.1

    • Remove the profile.

    • It is duplicated.

  • MA1413.1

    • Remove the profile.

    • It is duplicated.

  • MA1680.1

    • Remove the profile.

    • It is duplicated.

  • UN0058.1

    • Delete the profile.

    • TRP5 motif will be added to the CORE collection.

  • MA1399.1

    • Remove the profile.

    • It is duplicated.

  • UN0365.1

    • Remove the profile.

    • It is duplicated.

  • MA1271.1

    • Remove the profile.

    • It is duplicated.

  • UN0360.1

    • Remove the profile.

    • It is duplicated.

  • PH0113.1

    • Remove the profile.

    • NKX2-4 motif will be added to the CORE collection.

  • UN0381.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0378.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0382.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0377.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0376.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0375.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0374.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0373.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0372.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0370.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0369.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0367.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0364.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0358.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0356.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0350.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0349.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0348.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0347.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0346.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0345.1

    • Remove from Unvalidated collection.

    • There is another profile that will be added to the CORE.

  • UN0120.1

    • Remove from Unvalidated.

    • ETV7 motif will be added to the CORE collection.

  • UN0006.1

    • Remove from Unvalidated.

    • BHLH49 motif will be added to the CORE collection.

  • UN0260.1

    • Remove from Unvalidated.

    • A PRDM9 motif will be added to the CORE collection.

22/01/2021

We have updated the .sites and .bed files for the following profile matrices:

MA0110.3, MA0529.2, MA0565.2, MA0570.2, MA0974.2, MA0976.2, MA0992.2, MA0995.2, MA1001.2, MA1005.2, MA1227.2, MA1233.2, MA1238.2, MA1245.2, MA1265.2, MA1327.2, MA1365.2, MA1444.1, MA1445.1, MA1446.1, MA1456.1, MA1457.1, MA1603.1, MA1604.1, MA1606.1, MA1607.1, MA1659.1, MA1660.1, MA1661.1, MA1662.1, MA1668.1, MA1669.1, MA1670.1, MA1671.1, MA1672.1, MA1685.1, MA1686.1, MA1687.1, MA1688.1, MA1689.1, MA1690.1, MA1691.1, MA1692.1, MA1693.1, MA1694.1, MA1695.1, MA1696.1, MA1697.1, MA1698.1, UN0107.1, UN0108.1, UN0251.1, UN0252.1, UN0342.1, UN0343.1, UN0344.1, UN0345.1, UN0346.1, UN0347.1, UN0348.1, UN0349.1, UN0350.1, UN0351.1, UN0352.1, UN0353.1, UN0354.1, UN0355.1, UN0356.1, UN0357.1, UN0358.1, UN0359.1, UN0360.1, UN0361.1, UN0362.1, UN0363.1, UN0364.1

04/12/2019

The following TFFMs have been removed.

  • Remove TFFM0098.1 because of discrepancy with PFM. New TFFM version is better now
  • Remove TFFM0063.1 because of discrepancy with PFM.
  • Remove TFFM0083.1 because of discrepancy with PFM.
  • Remove TFFM0057.3 because of discrepancy with PFM. TFFM0057.2 is better
  • Remove TFFM0510.1 because of discrepancy with PFM.
  • Remove TFFM0541.1 because of discrepancy with PFM.
  • Remove TFFM0589.1 because of discrepancy with PFM.
  • Remove TFFM0602.1 because of discrepancy with PFM.
  • Remove TFFM0607.1 because of discrepancy with PFM.
  • Remove TFFM0615.1 because of discrepancy with PFM.
  • Remove TFFM0649.1 because of discrepancy with PFM.

13/09/2019

We've introduced the following changes in JASPAR 2020.

  • Profile MA1073.1 is removed because it is not a TF.
  • Validation 2516827 does not support http://jaspar.genereg.net/matrix/MA0835.1; this profile removed and replaced with the one coming from ReMap 2020
  • MA1004.1 and MA1254.1 entries for the same TF (ERF13). Keep MA1004.1
  • Rename TF Class (from *C2H2*  to *C2H2 zinc finger factors*) for the following profiles: MA1158.1, MA1156.1, MA1157.1,MA1159.1
  • For two profiles including MA1629.1 class: from *C2H2 zinc finger factors::C2H2 zinc finger factors* to *C2H2 zinc finger factors *
  • For 17 entries (e.g. http://jaspar.genereg.net/matrix/MA0102.3/), replace TF family C/EBP-related by C/EBP-related factors
  • Use validation 22284184 for profile http://jaspar.genereg.net/matrix/MA0818.1/
  • Use validation 31086315 for profile http://jaspar.genereg.net/matrix/MA1100.1/
  • Replaced  MA1469.1 by MA1101.2
  • Replaced MA1347.1 by MA0968.2
  • MA1319.1 this need to added as new verison for MA0577.1
  • Changed the TF family for 7 profile from "G2like" to "G2-like"
  • MA0529.2 UniProt ID has to be set to Q94513
  • Changed validation for MAX http://jaspar.genereg.net/matrix/MA0058.3/ to 8265351
  • AT4G36780 renamed as BEH2: https://www.uniprot.org/uniprot/Q94A43
  • At4g18890 renamed as BEH3: https://www.uniprot.org/uniprot/O49404
  • At1g78700 renamed as BEH4: https://www.uniprot.org/uniprot/Q9ZV88
  • AT2G03500 renamed as EFM: https://www.uniprot.org/uniprot/Q9ZQ85
  • AT4G31060 renamed as ERF015: https://www.uniprot.org/uniprot/Q6NLD5
  • AT1G19210 renamed as ERF017: https://www.uniprot.org/uniprot/Q84QC2
  • AT1G71450 renamed as ERF021: https://www.uniprot.org/uniprot/Q9C9I2
  • AT1G12630 renamed as ERF027: https://www.uniprot.org/uniprot/Q38Q39
  • AT3G60490 renamed as ERF035: https://www.uniprot.org/uniprot/Q9M210
  • AT1G77200 renamed as ERF037: https://www.uniprot.org/uniprot/O80654
  • AT1G28160 renamed as ERF087: https://www.uniprot.org/uniprot/Q9FZ90
  • AT3G25990 renamed as GT-4: https://www.uniprot.org/uniprot/Q9LU92
  • AT1G68670 renamed as HHO2: https://www.uniprot.org/uniprot/Q8VZS3
  • AT1G25550 renamed as HHO3: https://www.uniprot.org/uniprot/Q9FPE8
  • AT4G37180 renamed as HHO5: https://www.uniprot.org/uniprot/F4JRB0
  • AT1G49560 renamed as HHO6: https://www.uniprot.org/uniprot/Q9FX84
  • At5g47390 renamed as KUA1: https://www.uniprot.org/uniprot/Q9LVS0
  • AT3G04030 renamed as MYR2: https://www.uniprot.org/uniprot/Q9SQQ9
  • AT5G45580 renamed as PHL11: https://www.uniprot.org/uniprot/C0SVS4
  • AT3G12730 renamed as PHL12: https://www.uniprot.org/uniprot/Q8VYI2
  • AT5G29000 renamed as PHL1: https://www.uniprot.org/uniprot/Q8GUN5
  • AT2G01060 renamed as PHL7: https://www.uniprot.org/uniprot/Q9SJW0
  • At4g01280 renamed as RVE5: https://www.uniprot.org/uniprot/C0SVG5
  • At5g52660 renamed as RVE6: https://www.uniprot.org/uniprot/C0SVG5
  • At5g08330 renamed as TCP21: https://www.uniprot.org/uniprot/Q9FTA2
  • ATHB25 renamed as ZHD1: https://www.uniprot.org/uniprot/Q9FKP8
  • ATHB21 renamed as ZHD3: https://www.uniprot.org/uniprot/O64722
  • ATHB33 renamed as ZHD5: https://www.uniprot.org/uniprot/Q9FRL5
  • ATHB24 renamed as ZHD6: https://www.uniprot.org/uniprot/Q9ZPW7
  • Removed ID2 (MA0617.1) , ID4 (MA0824.1)
  • The validation PMID for ceh-48 MA0921.1 is incorrect and changed to 22080565.
  • http://jaspar2018.genereg.net/matrix/MA0069.1/ Pax6 => PAX6
  • The profile name NR1A4::RXRA has changed to NR1H4::RXRA
  • Striped UniProt Accession for profiles MA0037.3 and MA0831.2
  • Changed the TF family for profile [MA0610.1] from "DMRT" to "DMRT factors"
  • For profile MA1186.1, Class and Family set to Tryptophan cluster factors and    Myb/SANT domain factors, respectively.
  • For profile MA0637.1, Class set to CENP-B. For this family of TFs, there is no TF Class, so we used the assigned Pfam family instead.
  • For profile MA0610.1, we change the family form DMRT to DMRT factors.
  • For profile MA1160.1, could you replace the class from C2H2 to C2H2 zinc finger factors
  • For MA1368.1, Class has to be set to Tryptophan cluster factors
  • For the profile MA1366.1 Class has to be set to Tryptophan cluster factors and added Uniprot ID: Q9C6K3
  • MA1365.1 class is also Tryptophan cluster factors. The Name replaced to MNJ7.25 and the Uniprot ID to Q9FGJ1.
  • For MA1208.1, the name changed to GT-2, and the class to Tryptophan cluster factors
  • For MA1207.1, the Name GT-3A and the Class Tryptophan cluster factors
  • The TF name “T” for matrices MA0009.1 and MA0009.2 were changed to Tbxt and TBXT, respectively.
  • The Class for MA1020.1 and MA1367.1 replaced with Tryptophan cluster factors
  • Added Uniprot ID Q9M9A3 for profile MA1186.1
  • Changed Uniprot IDs for the following profiles: MA0328.1=P0CY08; MA0110.1=P46667; MA0058.1=P61244; MA0046.1=P20823; MA0098.1=P14921; MA0052.1=Q02078; MA0024.1=Q01094; MA0138.1=Q13127
  • Removed all the TFencyclopedia IDs for 526 profiles
  • Removed all the Pazar IDs for 793 profiles

31/10/2017

The plant profiles MA0173.1 (CG11617) was incorrect in JASPAR due to a manual annotation problem. The updated matrix PFM is:

>MA0173.1 CG11617
A  [     1      0     10     17      0     17      0 ]
C  [     0      0      0      0     17      0      0 ]
G  [     0      0      3      0      0      0      0 ]
T  [    16     17      4      0      0      0     17 ]

31/10/2017

The plant profiles MA1352.1, MA1353.1, MA1355.1 and MA1356.1 were incorrect in JASPAR 2018 release due to a manual annotation problem. The updated matrix PFMs are:

>MA1352.1 TRP1
A  [   253     19     17     30     29    302    304    307      4     13      1      3    296    295    306      3      6     24     13    290    263 ]
C  [     4    250    263    218      0      0      0      0    302    290    296      2      2      9      0    288    292    272      8      4      8 ]
G  [     8     11     14     11      3      2      1      0      0      0      6      2      2      2      0      1      4      0      1      6     28 ]
T  [    42     27     13     48    275      3      2      0      1      4      4    300      7      1      1     15      5     11    285      7      8 ]
>MA1353.1 AT1G72740
A  [   187    187    278    254      2      3    595      0      0      0      1     22     77    229     76 ]
C  [    94     71     23     10    107      1      0      1      0      3     28      1     33    120     82 ]
G  [   223    242    230     77      1      0      4    599    597    566      0      0     19     73    281 ]
T  [    96    100     69    259    490    596      1      0      3     31    571    577    471    178    161 ]
>MA1353.1 AT1G72740
A  [   187    187    278    254      2      3    595      0      0      0      1     22     77    229     76 ]
C  [    94     71     23     10    107      1      0      1      0      3     28      1     33    120     82 ]
G  [   223    242    230     77      1      0      4    599    597    566      0      0     19     73    281 ]
T  [    96    100     69    259    490    596      1      0      3     31    571    577    471    178    161 ]
>MA1356.1 TRP2
A  [   335    317     44     23     47     72    423    419    422      7      6      0      4    407    422    409     27     18     54     37    337 ]
C  [    34     24    303    344    272      0      0      1      2    416    414    416      3      2      1      4    350    383    303     43     28 ]
G  [    21     18     22     28     15      4      1      2      0      0      2      0      0     13      2      2      1      0      7      7     15 ]
T  [    35     66     56     30     91    349      1      3      1      2      3      9    418      3      0     10     47     24     61    338     45 ]

31/10/2017

We have added the .sites and .bed files for the following profile matrices in plants:

MA0110.2, MA0548.2, MA0555.1, MA0565.1, MA0573.1, MA0582.1, MA0586.2, MA0588.1, MA0931.1, MA0937.1, MA0938.1, MA0941.1, MA0943.1, MA0952.1, MA0953.1, MA0954.2, MA0964.1, MA0965.1, MA0971.1, MA0974.1, MA0981.1, MA0982.1, MA0983.1, MA0992.1, MA0993.1, MA0994.1, MA1000.2, MA1001.1, MA1005.1, MA1014.1, MA1020.1, MA1026.2, MA1043.1, MA1045.1, MA1047.1, MA1055.1, MA1059.2, MA1062.1, MA1065.1, MA1068.1, MA1069.1, MA1076.1, MA1077.1, MA1079.1, MA1081.1, MA1085.2, MA1087.1, MA1093.1, MA1156.1, MA1159.1, MA1162.1, MA1163.1, MA1164.1, MA1165.1, MA1167.1, MA1168.1, MA1172.1, MA1173.1, MA1174.1, MA1175.1, MA1176.1, MA1177.1, MA1178.1, MA1180.1, MA1182.1, MA1183.1, MA1184.1, MA1185.1, MA1186.1, MA1187.1, MA1188.1, MA1189.1, MA1190.1, MA1191.1, MA1195.1, MA1196.1, MA1197.1, MA1198.1, MA1203.1, MA1206.1, MA1207.1, MA1208.1, MA1211.1, MA1212.1, MA1213.1, MA1214.1, MA1215.1, MA1216.1, MA1217.1, MA1218.1, MA1219.1, MA1220.1, MA1221.1, MA1222.1, MA1224.1, MA1225.1, MA1226.1, MA1227.1, MA1228.1, MA1230.1, MA1231.1, MA1233.1, MA1234.1, MA1235.1, MA1236.1, MA1237.1, MA1238.1, MA1240.1, MA1241.1, MA1243.1, MA1244.1, MA1245.1, MA1246.1, MA1247.1, MA1249.1, MA1251.1, MA1255.1, MA1256.1, MA1259.1, MA1262.1, MA1263.1, MA1264.1, MA1265.1, MA1266.1, MA1267.1, MA1268.1, MA1269.1, MA1270.1, MA1271.1, MA1272.1, MA1273.1, MA1274.1, MA1275.1, MA1276.1, MA1277.1, MA1278.1, MA1279.1, MA1280.1, MA1281.1, MA1285.1, MA1286.1, MA1287.1, MA1288.1, MA1289.1, MA1291.1, MA1292.1, MA1293.1, MA1295.1, MA1298.1, MA1301.1, MA1302.1, MA1303.1, MA1305.1, MA1308.1, MA1309.1, MA1311.1, MA1313.1, MA1314.1, MA1315.1, MA1316.1, MA1317.1, MA1318.1, MA1321.1, MA1322.1, MA1323.1, MA1326.1, MA1327.1, MA1328.1, MA1329.1, MA1330.1, MA1331.1, MA1332.1, MA1333.1, MA1334.1, MA1335.1, MA1336.1, MA1337.1, MA1338.1, MA1340.1, MA1341.1, MA1342.1, MA1343.1, MA1344.1, MA1345.1, MA1346.1, MA1347.1, MA1348.1, MA1349.1, MA1351.1, MA1352.1, MA1353.1, MA1355.1, MA1356.1, MA1357.1, MA1359.1, MA1366.1, MA1369.1, MA1371.1, MA1372.1, MA1374.1, MA1375.1, MA1376.1, MA1378.1, MA1379.1, MA1380.1, MA1382.1, MA1384.1, MA1385.1, MA1386.1, MA1388.1, MA1389.1, MA1390.1, MA1391.1, MA1392.1, MA1393.1, MA1394.1, MA1395.1, MA1397.1, MA1398.1, MA1399.1, MA1400.1, MA1401.1, MA1404.1

20/10/2016

We have updated the .sites files for the following profile matrices:

MA0529.1, MA0535.1, MA0530.1, MA0452.2, MA0216.2, MA0534.1, MA0533.1, MA0531.1, MA0536.1, MA0247.2, MA0237.2, MA0532.1, MA0149.1, MA0166.1, MA0167.1, MA0169.1, MA0170.1, MA0171.1, MA0172.1, MA0175.1, MA0176.1, MA0177.1, MA0183.1, MA0189.1, MA0191.1, MA0192.1, MA0194.1, MA0195.1, MA0196.1, MA0199.1, MA0201.1, MA0203.1, MA0204.1, MA0206.1, MA0208.1, MA0209.1, MA0210.1, MA0211.1, MA0214.1, MA0217.1, MA0219.1, MA0221.1, MA0222.1, MA0225.1, MA0228.1, MA0229.1, MA0230.1, MA0233.1, MA0234.1, MA0235.1, MA0238.1, MA0240.1, MA0245.1, MA0247.1, MA0250.1, MA0253.1, MA0256.1, MA0257.1, MA0444.1

The corrected .sites files have not been retrieved for the following profile matrices:

MA0029.1, MA0030.1, MA0139.1, MA0141.1, MA0144.1, MA0145.1, MA0146.1, MA0147.1, MA0138.2, MA0104.2, MA0168.1, MA0173.1, MA0174.1, MA0178.1, MA0180.1, MA0181.1, MA0184.1, MA0193.1, MA0200.1, MA0202.1, MA0207.1, MA0216.1, MA0218.1, MA0227.1, MA0239.1, MA0246.1, MA0248.1, MA0252.1, MA0260.1, MA0443.1, MA0445.1, MA0446.1, MA0447.1, MA0448.1, MA0449.1, MA0454.1, MA0456.1, MA0457.1, MA0459.1

10/12/2014

The plant SOC1 TF (MA0554) is incorrect in JASPAR due to a manual annotation problem. The old incorrect matrix is:

##   [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13]
## A    0    0   33    0  139   78    0   78   64     0    59     0     0
## C  209  210  168  326  125  223  206  153    0   263    90   258   180
## G  115  135    0   44  119   95   23  123    6    99    57   134    10
## T  482  461  605  436  423  410  577  452  736   444   600   414   616
##   [,14] [,15] [,16] [,17] [,18] [,19] [,20] [,21]
## A     0    49   117     0    33    14    79   126
## C   343     0   286   121   208   190   240   136
## G    78   115     0     0    64     0    98   147
## T   385   642   403   685   501   602   389   397

The updated matrix is:

##   [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13]
## A  288  172   65   62  117   20    0  459  137   130    22    98    90
## C  123  264   27    0   47  855  617   37   78     6     8    24    71
## G   99  113   34   51   89   13    9   56    0     0     0     0    86
## T  378  339  762  775  635    0  262  336  673   752   858   766   641
##   [,14] [,15]
## A   181    17
## C    10    23
## G   683   665
## T    14   183