Detailed information of matrix profile MA1059.1

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Profile summary
Name: SPL5
Matrix ID: MA1059.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9S758  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 185 234 142 22 926 10 84 178 250 ]
C [ 172 195 53 37 67 974 60 59 299 ]
G [ 290 229 739 15 6 0 778 575 155 ]
T [ 354 342 66 927 0 15 79 188 296 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1059.1 MA1059 1 SPL5 Arabidopsis thaliana
SBP-type zinc finger
MA1059.2 MA1059 2 SPL5 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: