Detailed information of matrix profile MA1054.1

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Profile summary
Name: ARALYDRAFT_897773
Matrix ID: MA1054.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis lyrata subsp. lyrata
Data Type: PBM
Validation: 21241251
Uniprot ID: D7L3Y2  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 92 27 36 17 40 756 2 1 862 20 ]
C [ 278 79 4 7 125 215 949 995 2 907 ]
G [ 167 491 877 957 826 7 47 2 132 6 ]
T [ 463 402 83 19 9 22 2 1 4 67 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1054.1 MA1054 1 ARALYDRAFT_897773 Arabidopsis lyrata subsp. lyrata
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

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GC Content: