Detailed information of matrix profile MA1050.1

  1. Home
  2. Matrix > MA1050.1

Profile summary
Name: OsI_08196
Matrix ID: MA1050.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Oryza sativa Indica Group
Data Type: PBM
Validation: 21241251
Uniprot ID: A2X7K8  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 1 46 91 0 0 0 899 1 ]
C [ 1 0 91 863 999 999 50 855 ]
G [ 946 953 726 46 0 0 50 72 ]
T [ 53 0 91 91 0 0 0 72 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1050.1 MA1050 1 OsI_08196 Oryza sativa Indica Group
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: