Detailed information of matrix profile MA1026.1

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Profile summary
Name: ATHB-15
Matrix ID: MA1026.1
Class: Homeo domain factors
Family: HD-ZIP factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11247607
Uniprot ID: Q9ZU11  
Source:
Comment: Data is from PMID:24477691

Sequence logo

Frequency matrix

         
A [ 93 722 926 46 274 928 26 28 ]
C [ 172 193 32 10 62 16 15 57 ]
G [ 60 57 15 16 282 10 32 193 ]
T [ 675 28 26 928 381 46 926 722 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1026.1 MA1026 1 ATHB-15 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
MA1026.2 MA1026 2 ATHB15 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: