Detailed information of matrix profile MA1012.1

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Profile summary
Name: AGL27
Matrix ID: MA1012.1
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 24067612
Uniprot ID: Q9AT76  
Source:
Comment: Data is from PMID:25361952

Sequence logo

Frequency matrix

         
A [ 25 1 0 14 0 0 108 32 9 2 15 17 33 11 ]
C [ 78 4 0 0 142 55 0 2 0 0 21 15 0 2 ]
G [ 25 0 0 1 0 0 1 0 0 0 2 42 109 92 ]
T [ 14 137 142 127 0 87 33 108 133 140 104 68 0 37 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1012.1 MA1012 1 AGL27 Arabidopsis thaliana
MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: