Detailed information of matrix profile MA1011.1

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Profile summary
Name: PHYPADRAFT_72483
Matrix ID: MA1011.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Physcomitrella patens
Data Type: PBM
Validation: 21335373
Uniprot ID: A9RZ73  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 264 210 69 806 55 146 87 64 337 190 ]
C [ 238 181 849 0 800 0 106 17 272 308 ]
G [ 308 272 17 106 0 800 0 849 181 238 ]
T [ 190 337 64 87 146 55 806 69 210 264 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1011.1 MA1011 1 PHYPADRAFT_72483 Physcomitrella patens
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: