Detailed information of matrix profile MA0988.1

  1. Home
  2. Matrix > MA0988.1

Profile summary
Name: PHYPADRAFT_143875
Matrix ID: MA0988.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Physcomitrella patens
Data Type: PBM
Validation: 21335373
Uniprot ID: A9TDF9  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 250 208 106 923 22 39 66 38 169 256 ]
C [ 272 231 844 0 940 0 10 12 392 222 ]
G [ 222 392 12 10 0 940 0 844 231 272 ]
T [ 256 169 38 66 39 22 923 106 208 250 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0988.1 MA0988 1 PHYPADRAFT_143875 Physcomitrella patens
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: