Detailed information of matrix profile MA0985.1

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Profile summary
Name: DRE1C
Matrix ID: MA0985.1
Class: Beta-Hairpin-Ribbon
Family: AP2 MBD_like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 15319480
Uniprot ID: Q9SYS6  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 990 3 3 3 3 3 3 5 ]
C [ 3 3 3 3 990 3 3 495 ]
G [ 3 3 990 3 3 990 990 5 ]
T [ 3 990 3 990 3 3 3 495 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0985.1 MA0985 1 DRE1C Arabidopsis thaliana
AP2 MBD_like Beta-Hairpin-Ribbon
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: