Detailed information of matrix profile MA0980.1

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Profile summary
Name: RAP2-10
Matrix ID: MA0980.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 15319480
Uniprot ID: Q9SW63  
Source:
Comment: Data is from PMID:24477691

Sequence logo

Frequency matrix

         
A [ 33 22 117 6 4 9 8 33 ]
C [ 128 942 5 912 981 7 838 859 ]
G [ 757 14 872 78 9 952 85 16 ]
T [ 83 22 7 4 6 32 69 92 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0980.1 MA0980 1 RAP2-10 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: