Detailed information of matrix profile MA0961.1

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Profile summary
Name: BHLH112
Matrix ID: MA0961.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Oryza sativa Japonica Group
Data Type: PBM
Validation: 21335373
Uniprot ID: Q94JL3  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 221 0 177 1000 0 0 0 0 218 ]
C [ 250 1000 823 0 1000 0 0 0 343 ]
G [ 306 0 0 0 0 0 0 1000 217 ]
T [ 222 0 0 0 0 1000 1000 0 223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0961.1 MA0961 1 BHLH112 Oryza sativa Japonica Group
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: