Detailed information of matrix profile MA0954.2

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Profile summary
Name: ATHB7
Matrix ID: MA0954.2
Class: Homeo domain factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: P46897  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 288 271 49 9 598 600 0 132 598 37 54 66 382 ]
C [ 93 98 181 551 2 0 0 464 1 0 11 92 68 ]
G [ 91 57 46 3 0 0 0 2 1 3 62 389 58 ]
T [ 128 174 324 37 0 0 600 2 0 560 473 53 92 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0954.1 MA0954 1 ATHB-7 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
MA0954.2 MA0954 2 ATHB7 Arabidopsis thaliana
Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0297.1

ChIP-seq Centrality
log(P-value): -23983.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0297.1

ChIP-seq Centrality
log(P-value): -22794.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: