Detailed information of matrix profile MA0954.1

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Profile summary
Name: ATHB-7
Matrix ID: MA0954.1
Class: Homeo domain factors
Family: HD-ZIP factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11247607
Uniprot ID: P46897  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 152 27 1000 1000 0 0 1000 291 183 223 ]
C [ 338 828 0 0 0 1000 0 0 98 223 ]
G [ 152 27 0 0 0 0 0 0 190 330 ]
T [ 358 118 0 0 1000 0 0 709 528 223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0954.1 MA0954 1 ATHB-7 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
MA0954.2 MA0954 2 ATHB7 Arabidopsis thaliana
Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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