Detailed information of matrix profile MA0941.1

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Profile summary
Name: ABF2
Matrix ID: MA0941.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11005831
Uniprot ID: Q9M7Q4  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 231 308 191 274 699 0 999 0 19 19 218 213 229 ]
C [ 308 231 268 120 177 840 0 917 19 19 59 130 229 ]
G [ 231 231 191 403 103 0 0 0 942 19 664 287 229 ]
T [ 231 231 350 202 21 159 0 82 19 942 59 371 312 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0941.1 MA0941 1 ABF2 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0215.1

ChIP-seq Centrality
log(P-value): -7773.86

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0215.1

ChIP-seq Centrality
log(P-value): -7761.39

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: