Detailed information of matrix profile MA0905.1

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Profile summary
Name: HOXC10
Matrix ID: MA0905.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q9NYD6  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1495 26 315 2638 27 2165 3211 3211 3211 988 ]
C [ 1044 245 3211 6 0 5 3 76 551 679 ]
G [ 3211 0 12 3211 0 4 5 86 532 453 ]
T [ 15 3211 152 24 3211 1047 102 187 1069 1092 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0905.1 MA0905 1 HOXC10 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: