Detailed information of matrix profile MA0869.1

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Profile summary
Name: Sox11
Matrix ID: MA0869.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12920151
Uniprot ID: Q7M6Y2  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 305 305 0 305 305 0 0 41 0 305 0 0 0 0 1 ]
C [ 0 0 305 0 0 0 1 39 305 0 0 0 0 0 14 ]
G [ 0 0 0 0 0 0 0 305 0 0 305 2 305 0 5 ]
T [ 0 0 0 0 0 305 305 425 1 0 99 305 0 305 305 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0869.1 MA0869 1 Sox11 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: