Detailed information of matrix profile MA0852.1

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Profile summary
Name: Foxk1
Matrix ID: MA0852.1
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 16624804
Uniprot ID: P42128  
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PB0018.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 34 41 60 71 12 20 2 92 97 99 0 99 80 56 27 34 15 ]
C [ 19 12 7 4 12 1 0 8 1 0 89 0 6 9 30 22 27 ]
G [ 21 28 12 5 18 79 0 0 0 0 0 0 2 10 29 25 32 ]
T [ 26 20 21 20 58 0 97 0 2 0 11 0 11 24 14 19 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0852.1 MA0852 1 Foxk1 Mus musculus
Forkhead box (FOX) factors Fork head / winged helix factors
MA0852.2 MA0852 2 FOXK1 Homo sapiens
Forkhead box (FOX) factors Fork head / winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: