Detailed information of matrix profile MA0770.1

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Profile summary
Name: HSF2
Matrix ID: MA0770.1
Class: Heat shock factors
Family: HSF factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12027891
Uniprot ID: Q03933  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 173 23 16 1 3187 2 3187 3187 170 999 142 45 89 ]
C [ 37 2 3187 710 565 0 49 1 1406 468 68 89 3187 ]
G [ 91 47 2 293 792 3187 4 23 630 1209 88 43 117 ]
T [ 3187 3187 0 3187 0 1 28 108 981 511 3187 3187 364 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0770.1 MA0770 1 HSF2 Homo sapiens
HSF factors Heat shock factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: