Detailed information of matrix profile MA0678.1

  1. Home
  2. Matrix > MA0678.1

Profile summary
Name: OLIG2
Matrix ID: MA0678.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20959288
Uniprot ID: Q13516  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1609 680 74 1609 0 1609 21 10 4 146 ]
C [ 90 929 1609 2 0 22 159 3 396 689 ]
G [ 283 142 4 53 0 18 0 1609 866 57 ]
T [ 108 16 0 22 1609 4 1609 117 744 1609 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0678.1 MA0678 1 OLIG2 Homo sapiens
Tal-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0083.1

ChIP-seq Centrality
log(P-value): -4183.03

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0083.1

ChIP-seq Centrality
log(P-value): -4459.02

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: