Detailed information of matrix profile MA0674.1

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Profile summary
Name: NKX6-1
Matrix ID: MA0674.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P78426  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 403 0 1407 2212 0 58 2212 1450 ]
C [ 695 573 805 200 0 45 27 294 ]
G [ 734 0 0 12 0 0 132 142 ]
T [ 381 1640 195 40 2212 2212 17 327 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0674.1 MA0674 1 NKX6-1 Homo sapiens
NK-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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