Detailed information of matrix profile MA0626.1

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Profile summary
Name: Npas2
Matrix ID: MA0626.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: PBM
Validation: 23332764
Uniprot ID: P97460  
Source:
Comment: Data is from Weirauch PBM (2014)

Sequence logo

Frequency matrix

         
A [ 273 154 0 999 81 81 0 81 74 297 ]
C [ 177 377 999 0 918 0 0 0 172 299 ]
G [ 293 420 0 0 0 918 0 918 188 202 ]
T [ 257 48 0 0 0 0 999 0 566 202 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0626.1 MA0626 1 Npas2 Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: