Detailed information of matrix profile MA0602.1

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Profile summary
Name: Arid5a
Matrix ID: MA0602.1
Class: ARID domain factors
Family: ARID-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 25215497
Uniprot ID: Q3U108  
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PB0002.1 based on new evidence from Weirauch PBM (2014)

Sequence logo

Frequency matrix

         
A [ 18 16 85 96 6 93 2 4 23 34 29 57 29 34 ]
C [ 43 32 3 0 0 1 1 9 3 35 13 8 18 23 ]
G [ 23 3 7 1 1 1 1 4 52 18 27 19 26 15 ]
T [ 17 48 5 2 93 6 96 83 22 12 31 16 27 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0602.1 MA0602 1 Arid5a Mus musculus
ARID-related factors ARID domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: