Detailed information of matrix profile MA0586.2

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Profile summary
Name: SPL14
Matrix ID: MA0586.2
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 18302343
Uniprot ID: Q8RY95  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 245 232 126 65 2 0 583 0 0 26 377 ]
C [ 104 83 113 129 0 0 0 583 0 0 74 ]
G [ 86 104 105 87 581 0 0 0 583 534 7 ]
T [ 148 164 239 302 0 583 0 0 0 23 125 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0586.1 MA0586 1 SPL14 Arabidopsis thaliana
SBP-type zinc finger
MA0586.2 MA0586 2 SPL14 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0389.1

ChIP-seq Centrality
log(P-value): -6627.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0389.1

ChIP-seq Centrality
log(P-value): -6627.65

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: