Detailed information of matrix profile MA0586.1

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Profile summary
Name: SPL14
Matrix ID: MA0586.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 18302343
Uniprot ID: Q8RY95  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 2 4 4 4 3 3 0 0 0 0 20 0 12 6 4 8 3 3 5 ]
C [ 5 6 5 8 4 1 20 20 0 0 0 20 0 3 3 3 4 6 1 ]
G [ 4 4 6 1 9 4 0 0 20 0 0 0 8 8 7 5 8 8 11 ]
T [ 9 6 5 7 4 12 0 0 0 20 0 0 0 3 6 4 5 3 3 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0586.1 MA0586 1 SPL14 Arabidopsis thaliana
SBP-type zinc finger
MA0586.2 MA0586 2 SPL14 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: