Detailed information of matrix profile MA0143.1

Profile summary

Name: Sox2
Matrix ID: MA0143.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: P48432  
Pazar TF: TF0000779
TFBSshape ID:
TFencyclopedia IDs: 531
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 58 74 161 127 117 575 96 333 570 19 648 650 331 174 107 ]
C [ 61 157 36 84 444 26 38 77 9 529 6 7 4 22 89 ]
G [ 60 67 41 422 77 39 124 194 4 83 1 10 7 453 444 ]
T [ 485 366 426 32 27 26 408 64 85 38 14 2 327 20 27 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.