Detailed information of matrix profile MA0044.1

Profile summary

Name: HMG-1
Matrix ID: MA0044.1
Class: High-mobility group (HMG) domain factors
Family:
Collection: CORE
Taxon: Plants
Species: Pisum sativum
Data Type: SELEX
Validation: 9161031
Uniprot ID: Q41026  
Pazar TF:
TFBSshape ID: 47
TFencyclopedia IDs:
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 4 10 5 3 12 1 9 10 0 ]
C [ 1 2 0 3 0 10 0 3 8 ]
G [ 8 1 5 1 1 2 4 0 5 ]
T [ 0 0 3 6 0 0 0 0 0 ]

Binding sites information

TFBS profiles

External links