Detailed information of matrix profile PH0123.1

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Profile summary
Name: Obox3
Matrix ID: PH0123.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8VHG6  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 40 17 50 10 14 3 98 99 1 2 1 8 8 10 11 25 41 ]
C [ 7 11 16 9 13 1 0 1 0 97 91 77 63 58 33 35 15 ]
G [ 27 29 6 67 2 0 1 0 1 0 0 4 3 16 21 27 17 ]
T [ 26 43 28 14 72 95 1 0 98 1 8 11 26 15 34 13 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0123.1 PH0123 1 Obox3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: