Detailed information of matrix profile PH0121.1

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Profile summary
Name: Obox1
Matrix ID: PH0121.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9D350  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 26 44 7 22 5 98 99 0 4 0 2 5 7 8 47 39 ]
C [ 18 9 16 7 5 0 0 0 0 96 95 88 69 37 16 21 24 ]
G [ 33 20 15 62 2 0 1 1 3 0 0 1 2 11 11 11 13 ]
T [ 18 45 26 23 71 95 1 0 97 0 5 9 25 45 65 22 24 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0121.1 PH0121 1 Obox1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: