Detailed information of matrix profile PB0053.1

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Profile summary
Name: Rara_1
Matrix ID: PB0053.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P11416  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 24 32 12 22 0 2 99 10 1 0 1 6 20 39 25 33 ]
C [ 37 22 31 8 3 1 1 90 99 9 17 4 15 23 12 27 ]
G [ 17 23 38 52 0 98 0 0 0 1 1 5 41 27 36 18 ]
T [ 22 23 18 18 96 0 0 0 0 91 81 85 24 11 28 22 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0053.1 PB0053 1 Rara_1 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: