Detailed information of matrix profile PB0048.1

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Profile summary
Name: Nkx3-1_1
Matrix ID: PB0048.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P97436  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 12 24 10 11 6 95 99 0 4 13 1 23 11 35 44 19 ]
C [ 25 21 28 35 10 1 0 0 0 0 0 11 28 23 21 14 13 ]
G [ 25 17 24 34 5 1 5 0 96 0 87 82 18 15 13 15 36 ]
T [ 18 49 24 21 75 93 0 0 3 96 0 6 32 51 31 27 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0048.1 PB0048 1 Nkx3-1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: