Detailed information of matrix profile PB0020.1

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Profile summary
Name: Gabpa_1
Matrix ID: PB0020.1
Class: Winged Helix-Turn-Helix
Family: Ets
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q00422  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 22 28 29 26 83 0 10 1 0 0 0 0 5 40 24 18 17 ]
C [ 25 20 20 36 1 75 0 0 99 99 1 4 14 15 12 24 12 ]
G [ 25 20 26 18 13 2 0 0 0 0 95 94 3 16 20 29 36 ]
T [ 28 32 25 20 2 22 90 99 0 0 4 2 78 29 44 29 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0020.1 PB0020 1 Gabpa_1 Mus musculus
Ets Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: