Detailed information of matrix profile PB0016.1

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Profile summary
Name: Foxj1_1
Matrix ID: PB0016.1
Class: Winged Helix-Turn-Helix
Family: Forkhead
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q61660  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 30 28 22 18 16 4 8 2 9 1 86 3 28 27 22 ]
C [ 29 25 25 18 7 7 1 0 1 0 0 1 58 17 25 12 ]
G [ 16 21 18 29 4 17 1 91 1 7 16 9 3 18 22 21 ]
T [ 22 24 29 30 71 60 95 1 97 84 82 4 35 37 27 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0016.1 PB0016 1 Foxj1_1 Mus musculus
Forkhead Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: