Detailed information of matrix profile PB0010.1

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Profile summary
Name: Egr1_1
Matrix ID: PB0010.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P08046  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 21 14 3 12 0 0 0 26 1 2 2 57 18 18 ]
C [ 28 72 88 7 99 98 98 73 99 9 86 6 33 18 ]
G [ 20 5 1 78 0 1 0 0 0 65 4 17 13 23 ]
T [ 30 8 8 3 0 0 2 0 1 24 8 21 37 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0010.1 PB0010 1 Egr1_1 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: