Detailed information of matrix profile PB0005.1

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Profile summary
Name: Bbx_1
Matrix ID: PB0005.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8VBW5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 24 61 46 13 9 14 92 45 4 5 87 78 12 29 33 ]
C [ 19 16 14 3 2 75 3 8 2 6 2 5 28 13 6 ]
G [ 12 6 22 5 2 6 2 12 3 75 2 3 35 12 35 ]
T [ 44 18 18 78 87 5 4 34 92 14 9 13 24 46 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0005.1 PB0005 1 Bbx_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: