Detailed information of matrix profile MA1378.1

  1. Home
  2. Matrix > MA1378.1

Profile summary
Name: PLT3
Matrix ID: MA1378.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11058102
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 116 33 311 24 105 185 243 101 119 31 5 108 502 32 159 ]
C [ 24 386 59 473 17 97 41 46 238 278 517 33 3 13 16 ]
G [ 260 14 78 11 372 153 24 16 7 0 7 357 24 351 345 ]
T [ 131 98 83 23 37 96 223 368 167 222 2 33 2 135 11 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1378.1 MA1378 1 PLT3 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0377.1

ChIP-seq Centrality
log(P-value): -750.17

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0377.1

ChIP-seq Centrality
log(P-value): -719.694

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: