Detailed information of matrix profile MA1364.1

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Profile summary
Name: PIF7
Matrix ID: MA1364.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15448264
Uniprot ID: Q570R7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 18 2 112 0 6 0 0 19 13 54 24 19 33 42 14 ]
C [ 65 110 0 112 0 0 0 4 66 22 32 39 51 22 54 ]
G [ 24 0 0 0 106 0 112 85 29 8 14 8 9 20 33 ]
T [ 5 0 0 0 0 112 0 4 4 28 42 46 19 28 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1364.1 MA1364 1 PIF7 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: