Detailed information of matrix profile MA1242.1

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Profile summary
Name: AT3G57600
Matrix ID: MA1242.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SVX5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 110 19 0 3 0 0 0 14 132 67 91 ]
C [ 2 0 453 0 0 131 0 6 217 16 39 ]
G [ 346 438 0 475 478 0 477 458 11 347 309 ]
T [ 20 21 25 0 0 347 1 0 118 48 39 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1242.1 MA1242 1 AT3G57600 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: