Detailed information of matrix profile MA1100.1

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Profile summary
Name: ASCL1
Matrix ID: MA1100.1
Class: Basic helix-loop-helix factors (bHLH)
Family: MyoD / ASC-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23332764
Uniprot ID: P50553  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 730
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 1514 1316 4367 212 28 6820 21 165 55 18 334 1477 1533 ]
C [ 1815 2808 692 174 6920 61 280 6343 69 24 2193 2164 1772 ]
G [ 2607 2029 1260 6639 78 75 6703 523 72 6987 3523 1718 2478 ]
T [ 1116 899 733 27 26 96 48 21 6856 23 1002 1693 1269 ]

Binding sites information

   

TFBS profiles

No TFBSshape profile for this model.

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1100.1 MA1100 1 ASCL1 Homo sapiens
MyoD / ASC-related factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -5568.77

TFFM details

TFFM ID: TFFM0131.1

ChIP-seq Centrality
log(P-value): -21016.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0131.1

ChIP-seq Centrality
log(P-value): -20879.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: