Detailed information of matrix profile MA1064.1

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Profile summary
Name: TCP2
Matrix ID: MA1064.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 21241251
Uniprot ID: Q93V43  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 217 88 35 0 68 333 19 121 564 186 ]
C [ 168 194 0 0 78 521 981 844 154 429 ]
G [ 429 154 844 981 521 78 0 0 194 168 ]
T [ 186 564 121 19 333 68 0 35 88 217 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1064.1 MA1064 1 TCP2 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: