Detailed information of matrix profile MA1056.1

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Profile summary
Name: SPL11
Matrix ID: MA1056.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9FZK0  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 229 314 172 147 0 0 1000 0 21 21 572 188 ]
C [ 229 229 318 624 0 0 0 1000 21 21 78 271 ]
G [ 229 229 172 63 1000 0 0 0 936 773 78 188 ]
T [ 314 229 339 166 0 1000 0 0 21 185 271 353 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1056.1 MA1056 1 SPL11 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: